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==Goal==
 
==Goal==
Continued crossbreeding of the Contemplation vine.  Working toward children which are:
+
 
 +
I should have named this page "Contemplation 19" but I wasn't expecting to become so confused about all these crosses!
 +
 
 +
Continued crossbreeding of the '''Contemplation vine with 19 genes'''.  Working toward children which are:
 
*short enough to be mapped with a single revelation solvent
 
*short enough to be mapped with a single revelation solvent
*have no Y genes
+
*have '''no Y genes''', to be paired with a vine that has all Y genes.
 +
 
 +
==Tends==
 +
There are 68 possible children, created by crossing a Contemplation vine with 19 genes.
 +
 
 +
*34/68 are genetically identical to the parent, Q KK, Light Red Hue
 +
*17/68 are mutations with one gene duplicated at the splice point
 +
*17/68 are mutations with one gene deleted at the splice point
 +
 
 +
 
 +
*53/68 will have tends of Q KK, and have Light Red Hue.
 +
**34/53 ARE the same as the parent.
 +
**19/53 are mutations with the same tends and hue as the parent.
 +
*15/68 will be mutations that can be detected through tends or hue (see below)
 +
 
 +
 
 +
*1/15 will have tends of '''QQ''' KK, and Light Red Hue (duplication)
 +
*6/15 will have tends of '''wildQ''' and Light Red Hue
 +
**3/6 will have tends of wildQ KK, and Light Red Hue (all deletions)
 +
**2/6 will have tends of wildQ KK S, and Light Red Hue (both duplication)
 +
**1/6 will have tends of wildQ K, and Light Red Hue (deletion)
 +
*4/15 will have a '''White Hue'''
 +
**2/4 will have tends of Q KK, and White Hue (one deletion, one duplication)
 +
**2/4 will have tends of Q K, and White Hue (both deletions)
 +
*4/15 will have tends of Q '''K''' and Light Red Hue (two duplications, two deletions)
  
 
==Current Strategy==
 
==Current Strategy==
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*KRYRGYROGGGGGRYYROK
 
*KRYRGYROGGGGGRYYROK
 
*This vine has one Y removed from Contemplation, and is 19 genes long.  There are four Y genes remaining.
 
*This vine has one Y removed from Contemplation, and is 19 genes long.  There are four Y genes remaining.
*The hue is Light Red, and the genome tends as Q KK
+
*The hue is Light Red, and the '''starting genome tends as Q KK wildS'''
  
 
==Outcomes==
 
==Outcomes==
 
===Peacefulness#21===
 
===Peacefulness#21===
'''has a 8/57 (about 14%) chance of a deleted gene'''
+
'''has a 8/53 (about 15%) chance of a deleted gene'''<br>''' considering molecular balance'''
 +
*Hue is Light Red
 
* tend 1 matches KK and wildS.  Q is possible.
 
* tend 1 matches KK and wildS.  Q is possible.
 
* tend 2 matches Q KK wildS
 
* tend 2 matches Q KK wildS
 +
 +
*34/68 results have no change to the genome.  The tends of this vine match the original
 +
*34/68 results have a mutation
 +
**19/34 mutations also have the same tends as the original
 +
***8/19 have a deleted gene. (5 are -G, 2 are -R, 1 is -Y)
 +
considering for molecular balance
 +
 +
===Peacefulness#22===
 +
'''has a 8/53 (about 15%) chance of a deleted gene'''<br>''' considering molecular balance'''
 
* Hue is Light Red
 
* Hue is Light Red
 +
* tend 1: matches Q KK, cannot tell with wildS
 +
* tend 2: matches Q KK, cannot tell with wildS
 +
* only one cross does not have wildS, and it is a longer genome
 +
 +
===Peacefulness#23===
 +
'''has a 8/53 (about 15%) chance of a deleted gene'''<br>''' considering molecular balance'''
 +
*Hue is Light Red
 +
* tend 1, 2: Matches Q KK, cannot tell with wildS
 +
* tend 3, 4: matches Q KK wildS
 +
 +
===Peacefulness#24===
 +
'''This vine has a duplication of the R gene.'''<br>
 +
Molecular balance indicates that this vine is longer than its parent.
 +
*tend1: Matches Q. Does not match KK.  Cannot tell with wildS (not a positive tend)
 +
**Other possibility is K.  KK is a positive tend, K is a negative tend.  First tend did not show a positive tend.
 +
*Should be Q K.  Hue not yet known
 +
**6 possibilities yield Q K
 +
***4/6 are Q K H
 +
****2/4 are an R gene duplication
 +
****<s>2/4 are a gene deletion
 +
***2/6 are Q K wildH.  </s>
 +
****both are gene deletion
 +
*tends 2, 3: match Q K wildS
 +
*Hue is Light Red.  Not wildH
 +
 +
===Peacefulness#28===
 +
'''has a 8/53 (about 15%) chance of a deleted gene'''<br>''' considering molecular balance'''
 +
*tend 1, 2: Q KK wildS
 +
*Hue is light red
  
*38/76 results have no change to the genome.  The tends of this vine match the original
+
{{L|en}}
*38/76 results have a mutation
 
**19/38 mutations also have the same tends as the original
 
***8/19 have a deleted gene.
 

Latest revision as of 14:50, 13 May 2021

Goal

I should have named this page "Contemplation 19" but I wasn't expecting to become so confused about all these crosses!

Continued crossbreeding of the Contemplation vine with 19 genes. Working toward children which are:

  • short enough to be mapped with a single revelation solvent
  • have no Y genes, to be paired with a vine that has all Y genes.

Tends

There are 68 possible children, created by crossing a Contemplation vine with 19 genes.

  • 34/68 are genetically identical to the parent, Q KK, Light Red Hue
  • 17/68 are mutations with one gene duplicated at the splice point
  • 17/68 are mutations with one gene deleted at the splice point


  • 53/68 will have tends of Q KK, and have Light Red Hue.
    • 34/53 ARE the same as the parent.
    • 19/53 are mutations with the same tends and hue as the parent.
  • 15/68 will be mutations that can be detected through tends or hue (see below)


  • 1/15 will have tends of QQ KK, and Light Red Hue (duplication)
  • 6/15 will have tends of wildQ and Light Red Hue
    • 3/6 will have tends of wildQ KK, and Light Red Hue (all deletions)
    • 2/6 will have tends of wildQ KK S, and Light Red Hue (both duplication)
    • 1/6 will have tends of wildQ K, and Light Red Hue (deletion)
  • 4/15 will have a White Hue
    • 2/4 will have tends of Q KK, and White Hue (one deletion, one duplication)
    • 2/4 will have tends of Q K, and White Hue (both deletions)
  • 4/15 will have tends of Q K and Light Red Hue (two duplications, two deletions)

Current Strategy

Repeated crossing of Peacefulness#19 with a renamed clone of itself (Peace19) which has the genome of:

  • KRYRGYROGGGGGRYYROK
  • This vine has one Y removed from Contemplation, and is 19 genes long. There are four Y genes remaining.
  • The hue is Light Red, and the starting genome tends as Q KK wildS

Outcomes

Peacefulness#21

has a 8/53 (about 15%) chance of a deleted gene
considering molecular balance

  • Hue is Light Red
  • tend 1 matches KK and wildS. Q is possible.
  • tend 2 matches Q KK wildS
  • 34/68 results have no change to the genome. The tends of this vine match the original
  • 34/68 results have a mutation
    • 19/34 mutations also have the same tends as the original
      • 8/19 have a deleted gene. (5 are -G, 2 are -R, 1 is -Y)

considering for molecular balance

Peacefulness#22

has a 8/53 (about 15%) chance of a deleted gene
considering molecular balance

  • Hue is Light Red
  • tend 1: matches Q KK, cannot tell with wildS
  • tend 2: matches Q KK, cannot tell with wildS
  • only one cross does not have wildS, and it is a longer genome

Peacefulness#23

has a 8/53 (about 15%) chance of a deleted gene
considering molecular balance

  • Hue is Light Red
  • tend 1, 2: Matches Q KK, cannot tell with wildS
  • tend 3, 4: matches Q KK wildS

Peacefulness#24

This vine has a duplication of the R gene.
Molecular balance indicates that this vine is longer than its parent.

  • tend1: Matches Q. Does not match KK. Cannot tell with wildS (not a positive tend)
    • Other possibility is K. KK is a positive tend, K is a negative tend. First tend did not show a positive tend.
  • Should be Q K. Hue not yet known
    • 6 possibilities yield Q K
      • 4/6 are Q K H
        • 2/4 are an R gene duplication
        • 2/4 are a gene deletion
      • 2/6 are Q K wildH.
        • both are gene deletion
  • tends 2, 3: match Q K wildS
  • Hue is Light Red. Not wildH

Peacefulness#28

has a 8/53 (about 15%) chance of a deleted gene
considering molecular balance

  • tend 1, 2: Q KK wildS
  • Hue is light red